WORM Project Documentation

Important Links

• The WORM Portal website
• The WORM on GitHub
• Full code documentation for:
  • pyCHNOSZ for calculating and plotting reaction properties
  • AqEquil for aqueous geochemical speciation
  • AqOrg for estimating thermodynamic properties of aqueous organic molecules

Citing WORM Portal tools

• pyCHNOSZ

  • Boyer, G. (2024). pyCHNOSZ: Python wrapper for the thermodynamic package CHNOSZ (v0.8.15). Zenodo. https://doi.org/10.5281/zenodo.11406142
  • Dick JM (2019). CHNOSZ: Thermodynamic calculations and diagrams for geochemistry. Frontiers in Earth Science, 7, 180. doi: 10.3389/feart.2019.00180.

• AqEquil

  • Boyer, G., Robare, J., Park, N., Ely, T., & Shock, E. (2024). AqEquil: Python package for aqueous geochemical speciation (v0.19.0). Zenodo. https://doi.org/10.5281/zenodo.13530217
  • Wolery, T.J., 2013, EQ3/6 - Software for Geochemical Modeling, Version 8.0a, LLNL-CODE-2013-683958, Lawrence Livermore National Laboratory, Livermore, California.

• AqOrg

  • Grayson Boyer, Jordyn Robare, & Everett Shock. (2021). AqOrg v0.1.11 (v0.1.11). Zenodo. https://doi.org/10.5281/zenodo.5539934